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DATASETS

MetMap pan-cancer cohort annotation

  • 493 Cell lines
  • 21 cancer types
  • Pooling scheme
  • Derived from Primary/Metastasis
  • Gender
  • Ethnicity
  • Age
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MetMap 500

  • 488 cell lines
  • 21 cancer types
  • Metastatic potential
  • Penetrance
  • 5 Target organs (bone, brain, kidney, liver, lung)
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MetMap 125

  • 125 cell lines
  • 21 cancer types
  • Metastatic potential
  • 4 Target organs (bone, brain, liver, lung)
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Basal breast cancer cohort annotation

  • 21 Cell lines
  • Pooling scheme
  • Derived from Primary/Metastasis
  • Gender
  • Age
  • Grade and TNM
  • Growth characteristics
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Basal breast cancer cohort

  • 21 cell lines
  • Metastatic potential
  • Penetrance
  • 5 Target organs (brain, lung, liver, kidney, bone)
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ADDITIONAL RESOURCES

Supplementary Table 06 | Signature gene list
Supplementary Table 07 | Differential analysis of SREBF1 KO RNASeq
Supplementary Table 08 | Differential analysis of in vivo transcriptome of breast cancer metastasis
Supplementary Table 09 | Tissue dissociation buffers and programs
Supplementary Table 10 | Crispr data count, guide sequence, CRISPR-seq primer sequence
MetMap custom code