NIFK

nucleolar protein interacting with the FHA domain of MKI67

Dependent Cell Lines

CRISPR: 625/625 COMMON ESSENTIAL

RNAi: 597/708 COMMON ESSENTIAL

Dependency Score


Dependent Cell Line: A cell line is considered dependent if it has a probability of dependency greater than 0.5.
Dependency Score: Outcome from DEMETER2 or CERES. A lower score means that a gene is more likely to be dependent in a given cell line. A score of 0 is equivalent to a gene that is not essential whereas a score of -1 corresponds to the median of all common essential genes.
Common Essential: A gene which, in a large, pan-cancer screen, ranks in the top X most depleting genes in at least 90% of cell lines. X is chosen empirically using the minimum of the distribution of gene ranks in their 90th percentile least depleting lines.


Enriched Lineages

CRISPR

Dependency Score (CERES)

RNAi

Dependency Score (DEMETER2)

1. Esophagus Squamous (5.0e-06)
2. Esophagus (2.0e-05)
3. Colorectal MSI (3.2e-05)


Enriched lineages have p-values < 0.0005 shown in parentheses.


Expression & CN

TPM (log2)


Copy Number log2(relative to ploidy + 1)



Top Co-dependencies

CRISPR (Avana) Public 19Q3

GenePearson correlation
PlotRSL1D10.22
PlotCEBPZ0.22
PlotRPL18A0.22
PlotRPL240.22
PlotZNF1060.21

Combined RNAi (Broad, Novartis, Marcotte)

GenePearson correlation
PlotFTSJ30.44
PlotDDX100.42
PlotEXOSC50.38
PlotDDX180.38
PlotDDX270.37

Target Tractability



Description

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Methylation (1kb upstream TSS) (2 122494503-122495503)

CpG Methylation

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  • Official symbol: NIFK
  • Full name: nucleolar protein interacting with the FHA domain of MKI67
  • Location:
  • Also known as: MKI67IP, hNIFK, Nopp34
  • Entrez ID: 84365
  • Ensembl ID: ENSG00000155438

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