HSPE1

Description

heat shock protein family E (Hsp10) member 1

Summary

This gene encodes a major heat shock protein which functions as a chaperonin. Its structure consists of a heptameric ring which binds to another heat shock protein in order to form a symmetric, functional heterodimer which enhances protein folding in an ATP-dependent manner. This gene and its co-chaperonin, HSPD1, are arranged in a head-to-head orientation on chromosome 2. Naturally occurring read-through transcription occurs between this locus and the neighboring locus MOBKL3.[provided by RefSeq, Feb 2011]

Location

2q33.1

External Links
GeneCards , NCBI

Executive summary

  • HSPE1 was screened in 216 cell lines with 3 shRNAs, and 285 cell lines with 5 shRNAs.
  • HSPE1 was a six-sigma dependency in 12 cell lines.
  • The search for "Related features" MDPs resulted in the most predictive model for HSPE1 which had an out-of-bag R^2 of 0.15 (FDR 4.69e-02). In addition, this gene had a significant model when searching for the following MDPs: "Related features".

Dependency profile

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Scatterplots of dependency vs Expression/Copy Number

Scatterplot Dependency vs Expression

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Scatterplot Dependency vs Copy Number

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Gene's correlated to HSPE1's dependency profile

Table genes' correlated

Correlated gene dependency Correlation (r) Z_score

Correlation graph for HSPE1

Biomarkers for dependency on HSPE1 (ATLANTIS)

Context Dependency dataset Biomarker types Biomarker subset Score transform Top biomarker R^2 P-Value FDR Reports

ShRNA Hairpin level scores

55k shRNA library (v2.4.6)

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98k shRNA library (v2.19.2)

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ShRNA Quality

shRNA ID Gene Symbol Seed1 Sequence Seed2 Sequence Gene Rsquared Seed1 Rsquared Seed2 Rsquared Seeds Rsquared Other Gene Rsquared Total Rsquared Alpha1 Alpha2 Beta Other Gene Symbol